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K. Kechris*, J. Yang* and R.-F. Yeh (2008). Prediction of Alternatively Skipped Exons and Splicing Enhancers from Exon Junction Arrays. (Submitted)
(* these authors contributed equally)W. Hu, L. Saba, K. Kechris, S. Bhave, P. Hoffman and B. Tabakoff (2008). Genomic insights into acute alcohol tolerance. Journal of Pharmacology And Experimental Therapeutics, 326: 792-800. [PubMed]
B. Tabakoff, L. Saba, K. Kechris, W. Hu, S. Bhave, D. Finn, N. Grahame, P. Hoffman (2008). The genomic determinants of alcohol preference in mice. Mammalian Genome , 19:352-65. [PubMed]
S. Bhave, C. Hornbaker, T. Phang, L. Saba, R. Lapadat, K. Kechris, J. Gaydos, D. McGoldrick, A. Dolbey, S. Leach, B. Soriano, A. Ellington, E. Ellington, K. Jones, J. Mangion, J. Belknap, R. Williams, L. Hunter, P. Hoffman and B. Tabakoff (2007). The PhenoGen informatics website: Tools for analyses of complex traits. BMC Genetics 8:59. [PubMed]
C. Washenberger, J. Han, K. Kechris, B. Jha, R. Silverman and D. Barton (2007). Hepatitis C virus RNA: Dinucleotide frequencies and cleavage by RNase L. Virus Research 130:85-95. [PubMed]
H. Kim, K. Kechris and L. Hunter (2007). Mining discriminative distance context of transcription factor binding sites on ChIP enriched regions. Lecture Notes in Computer Science: International Symposium on Bioinformatics Research and Applications, ISBRA 2007 Proceedings, pg 338-349.
K. Kechris, J. Lin, P. Bickel and A. Glazer (2006). Quantitative exploration of the occurrence of lateral gene transfer by using nitrogen fixation genes as a case study. Proceedings of the National Academy of Sciences, USA, 103:9584-9589. [PubMed] [Errata]
A. Klebes, A. Sustar, K. Kechris, H. Li, G. Schubiger and T. Kornberg (2005). Regulation of cellular plasticity in Drosophila imaginal disc cells by the Polycomb group, trithorax group and lama genes. Development, 132:3753-3765. [PubMed]
E. van Zwet, K. Kechris, P. Bickel and M. Eisen (2005). Estimating motifs under order restrictions. Statistical Applications in Genetics and Molecular Biology, Vol. 4: No. 1, Article 1. [PubMed]
K. Kechris, E. van Zwet, P. Bickel and M. Eisen (2004). Detecting DNA regulatory motifs by incorporating positional trends in information content. Genome Biology, 5:R50. [PubMed]
P. Bickel, K. Kechris, P. Spector, G. Wedemayer and A. Glazer (2002). Finding “important” sites in proteins. Proceedings of the National Academy of Sciences, USA, 99:14764-14771. [PubMed]